A Breathalyzer For Cancer 123
Tiger4 writes "Cancer researchers in the UK have come up with a way to sniff for lung cancer on the breath. 'From the results, the researchers identified 42 "volatile organic compounds" (VOCs) present in the breath of 83% of cancer patients but fewer than 83% of healthy volunteers. Four of the most reliable were used to develop a nine-sensor array made from tiny gold particles coated with reactive chemicals sensitive to the compounds.' Other sources have picked up the story as well. Obviously, this would be a big breakthrough for rapid screening, and early detection significantly improves outcomes."
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Re:Makes sense (Score:5, Insightful)
Quote from FA: "Moreover, in a break from the convention in medical innovation, the researchers claim that full clinical trials may not be necessary to take this new technology to a stage where it is hospital-ready. They believe instead that they could prove the device's accuracy using a series of "artificial mixtures" of particulates that could simulate cancerous and healthy breath. "
In short: We are only in it for the money.
CC.
Re:Makes sense (Score:5, Insightful)
Since when did research/production/innovation with the goal of making money become a bad thing? It's like it's become a taboo.. making money, it's for the exchange of goods and services!
Pay them in jelly-beans! everyone loves jelly-beans! awww look! they're doing it for jellllyyy beeaaanns
Living causes cancer. (Score:2, Insightful)
It should be obvious now that our bodies have cells that replicate. Sometimes the replicas are perfect but occasionally they are not. After a certain number of replications the errors add up. Most errors are benign but a small fraction are not. With billions of cells replicating there's a statistical certainty that if you don't die of something else then cancer will get you.
The preventative for cancer is to have cells that replicate perfectly, or to not have cells that replicate.
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The preventative for cancer is to have cells that replicate perfectly, or to not have cells that replicate.
So what you're really trying to say is that vampirism is a viable means to prevent cancer.
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Or to have an immune system that can detect and flush out badly replicating cells, really.
At an optimistic guess, we're probably about 10-15 years away from being able to do that with genetics or nanotechnology. Maybe 20-30.
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After a while the immune system may have to kill nearly every cell to do that, including many of its own cells. It'll be a bit like removing all the rust from an old car that's already mostly rust
My guess is after a while of aging it's hard for the body to figure out what is a good cell - since the cells would have drifted "apart" from each other and the "ideal" - one skill cell would be not quite the same as
Re:Makes sense (Score:4, Interesting)
they may only be detecting those individuals who smoke vs those who dont.
About a quarter of Israelis smoke overall. About 11% of those - with a strong correlation toward heavy smokers - will eventually get cancer. About ten percent of those will continue to smoke. If that were the case, given 40 diagnosed patients and 56 healthy ones, their results would be statistically identical between groups. The results were not. Therefore, I'm guessing that your guess is simply some unreasoning dislike for tobacco users rather than a reasoned critique of the methodology. In fact, assuming the data aren't fudged, it's statistically much more likely that you, a nonsmoker (I assume), will get lung cancer than that their technique only identifies smokers.
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If that was the case then assuming their detector is perfect at detecting "was or is a smoker" they'd have a 63% false negative rate and a 30% false positive rate.
If they perfectly detected "is currently a smoker" they'd have a 100% false negative rate and a 30% false positive rate.
So your guess is completely off the mark.
Numbers from: http://www.nature.com/nnano/journal/vaop/ncurrent/extref/nnano.2009.235-s1.pdf [nature.com]
P.R. Alert. Misleading Slashdot summary. (Score:5, Informative)
It was proven long ago that dogs can smell chemicals associated with cancer. For example, see this 2006 article in National Geographic News, Dogs Smell Cancer in Patients' Breath, Study Shows [nationalgeographic.com]. That's part of what started the present interest in making a machine to detect cancer.
This February 2007 article is more interesting: Compact lung-cancer breath test may be possible [newscientist.com]. Quote: "The test uses 36 chemical dots that react to telltale compounds in a person's breath. The dots change colour when exposed to compounds that signify the presence of lung cancer."
This February 2007 article gives more information about how it is done: US Scientists Prototype Breath Test For Lung Cancer [medicalnewstoday.com]
Even Oprah's magazine had article in June 2009 about dogs sniffing cancer and making machines to imitate dogs: Sniffing Out Cancer [oprah.com]. Quote: "The researchers are collaborating with scientists at the University of Maine, who are trying to mimic the dogs' cancer-sniffing abilities with laboratory machines." Another quote: "So far, the Pine Street Foundation dogs have done 25,000 scent trials for ovarian cancer."
Slashdot: Not quite as current as Oprah? Old news for nerds who were playing video games and wouldn't know the difference?
Many researchers are doing similar work. For example, see the February 2008 article, The Cancer Breathalyzer [medgadget.com]. Quote: "Dr Yousef
Other researchers are studying the possibility of using blood tests to detect cancer. See the December 2007 article, Study points to possibility of blood test to detect lung cancer [physorg.com].
Here is a November 2005 research paper that surveys some of the issues of early detection of cancer: The Progress and Promise of Molecular Imaging Probes in Oncologic Drug Development [aacrjournals.org].
Dogs are expensive. (Score:2)
One of the ideas is to check millions of people routinely. Machines could be available in grocery stores, for example. At present both dogs and machines are too expensive for routine checks, however.
Oscar (cat) (Score:3, Interesting)
There's a cat that seems to be able to tell when someone is about to die. [wikipedia.org]
Re:Oscar (cat) (Score:5, Funny)
There's a cat that seems to be able to tell when someone is about to die. [wikipedia.org]
I'm sorry sir... but according to your latest cat scan, your death is imminent.
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There really needs to be a +1 Punny moderation.
Re:Oscar (cat) (Score:5, Funny)
Re:Oscar (cat) (Score:5, Funny)
Re:Oscar (cat) (Score:4, Funny)
I'm sorry sir... but according to your latest cat scan, your death is imminent.
Wow, a trustworthy cat! Mine always pretends she's starving.
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>>There's a cat that seems to be able to tell when someone is about to die.
Yeah. There's also a dog that can detect heart disease.
Together they're great fun at geriatric parties.
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Would going to see the dog who detects heart disease be considered "going to the hospital Lab"?
Re:Oscar (cat) (Score:5, Funny)
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Is that before or after you open the box?
No he is not (Score:2)
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The reality behind Oscar is, like the reality behind everything, a bit depressing and obvious.
Typically, when someone is about to die, their ability to regulate body temperature breaks down and they are covered with warming blankets. Cat owners nod.
Every patient the cat slept next to eventually died of the same drug-resistant bacterial infection. Assuming the cat could sense this infection in some way, likely by smell, what was the motive for identifying and preferring the smell? Probably the fact that pati
Re:Oscar (cat) (Score:5, Funny)
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I didn't know we are allowed to quote House episodes as scientific fact nowadays.
No, that's not very reliable. If you want a dependable source of science you cite the House Wiki [wikia.com] or Scott's blog [politedissent.com].
Oh, and Scott? He's just some Doctor Who happens to love House. :).
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Oh, and Scott? He's just some Doctor Who happens to love House. :).
Well to be honest, when it comes to fictional characters I do trust The Doctor's judgement, however upon further research I find no evidence that this "Scott" was any Doctor Who [wikipedia.org].
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The House episode was based off reality. I got my information from Wikipedia (which cites a few medical journal writeups about the cat).
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I trusted your information more when I thought it was from House.....
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Did anyone bother to check if the cat was a walking petri dish carrying that particular bacteria to anyone foolish enough to let it near them?
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lol
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Maybe because the cat is what kills them... Has anyone ever thought about that?
Sensitivity and specificity? (Score:5, Interesting)
Let me introduce you to my friend Reverend Bayes [hmc.edu].
Re:Sensitivity and specificity? (Score:4, Insightful)
Re:Sensitivity and specificity? (Score:4, Insightful)
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The way I understand it, a negative test doesn't mean you are free of cancer. A positive test doesn't mean you have cancer. With such low accuracy the test is useless.
What do you do with the result? You cannot skip further tests if it says you don't have cancer and you cannot skip them if it says you do. So where's the point?
Maybe some bullshit MBA will think it will save 83% of the expensive tests. Let's just let all those false negatives die because it's cheaper.
Re:Sensitivity and specificity? (Score:5, Insightful)
I would run whichever test had the highest profit margin.
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I would run whichever test had the highest profit margin.
Except that the patient's insurance policy will only pay for the cheap one.
Re:Sensitivity and specificity? (Score:5, Informative)
That's not how it works. Assuming 83% is the accuracy for both positives and negatives, and given a group of 100 people, 10 of whom have lung cancer, we would expect on average:
2 patients with cancer will not be detected.
17 cancer-free patients will be told they may have cancer.
If our patients have no increased risk for cancer, then our group of 17 false-positives are suddenly scared into receiving further (possibly expensive) further testing. Our two patients whose cancer was not detected ignore futher testing until it is too late.
Basically, this technique is mostly useless for general screening. Of course, widespread screening generally is a bad idea, due to false positives, so the best bet is always to stick with those with higher risks only. I could see this method gaining use in developing nations where an expensive test is not possible, as the false-negative rate is still smaller than the current rate of undiagnosed cancer. However, dealing with the false-positives is still a bitch.
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However, dealing with the false-positives is still a bitch.
That really depends on why you're running the test in the first place. Yes, general screening would probably be a bad idea as the accuracy is too low, but, if the patient was going to have a cancer test regardless of the situation, the cheap test could serve as a decision aid: you tested positive on the cancer-breath test which warrants more testing or you tested negative so you don't have to worry about it. Without the breath-test, these 17 false positives may have taken the normal cancer test anyways beca
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That really depends on why you're running the test in the first place. Yes, general screening would probably be a bad idea as the accuracy is too low, but, if the patient was going to have a cancer test regardless of the situation, the cheap test could serve as a decision aid: you tested positive on the cancer-breath test which warrants more testing or you tested negative so you don't have to worry about it. Without the breath-test, these 17 false positives may have taken the normal cancer test anyways because they come from the subset of people who get cancer screening and not the general population.
There are 4 results, only one of which is beneficial, if you were already planning to take the test.
1) The test correctly diagnoses cancer free, at a fraction of the cost (good)
2) The test correctly diagnoses cancer, in which case it's just an additional test
3) False-positive, leading to stress until the actual test can be taken (bad)
4) False-negative, leading to a loss of early detection, and possibly death (also bad)
Basically, its use is limited significantly due to those false results, assuming it's
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You have signs of cancer. You run this test as part of a routine screening. If you already thought you might have cancer and the tests says negative, you still run the more expensive test because 17% of the time it is wrong.
You have no signs of cancer. You run this test and it says you are positive. SO you run the real test.
Net net, this will always always cost society more, a lot more. The false positives and false negative
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I think that the article is trying to say that "fewer than 83 percent" means that the remaining percentage is the "fewer", AKA the 17 percent.
I'm hopeful that it's just a case of poor wording, as it wouldn't be an effective test or really news worthy other than a study if it got 83% false positives.
Making the actual testing device seems to give credit to the idea that it is a mis-statement of the results.
Re:Sensitivity and specificity? (Score:4, Informative)
Confirmed:
It's 86 percent accuracy:
http://www.google.com/hostednews/afp/article/ALeqM5gD0oDWeDtMfAYl0C5bvx6Yyd78Yg [google.com]
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I dunno, breathalyzers with a hit rate lower than that get you arrested for DUI...
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Well... I didn't understand any of the key parts of that to be honest. I was wondering though about level of detection. How much cancer do these cancer patients have? If they are, for example, on death's door of lung cancer, they might be exhaling large amounts of a chemical produced by the tumors. For this to be of real use in preventative medicine, you'd want to detect the cancer before there were obvious signs, before the cancer spreads, when it's just a few cells.
It will be amazing if this thing can
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Let me introduce you to my friend Reverend Bayes [hmc.edu].
Worst. Gun. Introduction. Evar.
Driving with cancer is a crime? (Score:3, Funny)
False positives? (Score:2, Insightful)
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Neither of the other articles includes a statistic, so I'd just assume there's a (more-than-just-statistically-)significant difference for now.
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True, but it would have to be a lot less than 83% to be useful. Even if only 50% of people without cancer have it, add in the fact that the vast majority of people do not have cancer, and you have a test where almost everyone is a false positive. You'd really need closer to the 3% to have a test that can actually discriminate well.
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Either that or the false negatives will have to be a lot less than 17%. I wouldn't care about false positives so much if false negatives were close to 0 - at least it would eliminate the need to do more expensive tests on those who get a negative result. If you always have to test further regardless of the result then what's the point?
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Hrm.. (Score:5, Funny)
So, next time you get pulled over:
"Sir, were you aware of how fast your cancer was progressing?"
Early detection doesn't always improve outcomes (Score:5, Insightful)
Non-oncs generally don't understand that a whole lot of cancer is "clinically irrelevant". That is, it would never go on to kill you. Thus, as early detection gets better in most areas, you detect a greater percentage of cancer that was never going to hurt the patient. However, once you see the cancer, you are duty-bound to slash/burn/poison (Susan Love's famous chapters) to cure it. Statistically speaking, you know you are actually harming some patients, but it is a dilemma -- you hurt all the patients in order to serve a greater good for some percentage of them. A good example is the growing backlash against general PSA screening. Even just a biopsy for prostate cancer can't be 100% risk-free, but the treatment is really risky, assuming you're not enthusiastic about being impotent and/or incontinent for the rest of your life.
So don't get too excited about increased early detection of cancer. Currently, it is usually a double-edged sword that brings suffering to some percentage of patients who would have avoided it before the new test existed. An exciting development would be a detection test for distinguishing cancer that's just sitting there from cancer that's on the move and likely to kill.
Re:Early detection doesn't always improve outcomes (Score:5, Interesting)
I wish my Cancer had been detected earlier (Hairy Cell Leukaemia). Certainly before my immune system had been virtually trashed. Then the Chemo killed it completely but that is the nature of Chemo.
There are many cancers that creep up on you slowly and almost unrecognised until they hit a critical mass. Any early detection of this type of cancer would be most welcomed by the people who have the misfortune to suffer from them.
Just my $0.02 worth.
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There are many cancers that creep up on you slowly and almost unrecognised until they hit a critical mass
But the immune system may get rid of a lot of those asymptomatic cancers. In your case, early detection might have helped, but in the case of many other people, the treatment may just get rid of a cancer that the immune system would have gotten rid of anyway.
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Great point, but like your point, you point totally misses the point. Detecting cancer in Phase 1 means you will almost certainly live. Detecting in Phase 3 means you're dead. False positives in Phase 1 are not a big worry as you point points out.Grow a pair of nuts and raise, live without fear, and ed-u-ma-cate yo sef about reality.
***Like most overly critical (and totally correct) slashdot.org points this one illustrates that "perfect is the enemy of the good".
Re:Early detection doesn't always improve outcomes (Score:4, Insightful)
It depends on how you value various things. Detecting a lot of people who would not have died anyway in Phase 1 will raise your overall survival rates (those people will still live), but may make a whole lot of people's lives shittier. Is removing an X% change you'd have died worth a Y% chance that you unnecessarily made your life shitty for years? Depends on X, Y, and your preferences.
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So yeah, false positives in any stage are a big deal, unless you think that cojones means that you volunteer to get cancer.
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Incidentally, one thing I learned from the experience is that although
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I hate PSA screenings. The "This is your brain on drugs." one was just lame.
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How did the parent get modded as insightful? Let's try this again. Comparing almost always fatal lung cancer (from TFA) affecting a variety of age groups to slow-moving often 'clinically irrelevant' prostate cancer (not from TFA) whose onset affects primarily the elderly is both Troll and Offtopic.
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Primary lung cancers themselves most commonly metastasize to the adrenal glands, liver, brain, and bone. Secondary lung cancers can be indicative of other cancers whose prognosis is also dependent upon the ear
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You may have an anger problem
Tumour on the adrenal gland? I just watched that episode of House with LL Cool J.
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Even a non-onc like me would READ THE FUCKING ARTICLE SUMMARY to understand how this device doesn't pick up prostate cancer molecules from your breath.
Just wait until they make a ptest version of this.
If it did, you have serious problems for which I would NOT refer you to an oncologist, especially you.
Wouldn't that be for colon cancer?
Painfully fucking stupid and ten years out of date (Score:2, Flamebait)
Dogs can do this for $2000 in training, yellow jackets for even less. It is hubris to think techmology is better than a billion years of dice and death.
Re:Painfully fucking stupid and ten years out of d (Score:3, Insightful)
Let me re-phrase that...
"This is a story about a way to patent and monetize something that can be done on the cheap already."
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The device in the article sounds really crap though - consistently crap is not very useful.
I'd be more interested when it is far more accurate. Right now it's not news at all.
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What is wrong with these statements? The truth is more useful to us when we know what it is. Way t
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Actually, ignoring the Sun as a source of energy really is stupid.
Big oil is laughing all the way to the bank every time we burn gas instead of burn sun.
The other stuff you mentioned, maybe.
But you need to see the light.
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If horses were cheaper many people would still use them. Horses are now freakishly expensive.
Back to MY point, this is an incredibly expensive and difficult way to detect cancer compared with training a dog. Why would someone do this? 1. People are dumb. 2. People who are smart try and find ways to take dumb peoples money. 3. People are scared of cancer and think that technology will save them.
REALLY think about what a $2000 dollar cancer detector that loves kids and is powered by dog food and tennis balls
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Bad test. (Score:3, Insightful)
Just recentely an article was published about the effects of a "non-perfect" screening test on a large group of people. (They did a case study for a specific test, which gives the same results as the theoretical example below)
If you have a test that is 99% accurate and 1 in 1000 people have the illness, for every million people, you'll find 990 out of a thousand who DO have the disease. And you send home 10 people who do have the disease. Too bad, 990 got the proper treatment. Right? No! Of the 999000 who don't have the disease, you'll find 9990 people with positive results. Are they getting treated? Are there risks to further tests? (for example X-rays create a risk for cancer later on.... )
And finding the 990 people WITH the disease from the 10980 people who tested positive is going to be a hassle. And costly.
Now a test with a 99% accuracy is pretty good compared to this test. As I read the slashdot intro, there is a 17% false negative rate, and up to 82% false positve rate....
Re:Bad test. (Score:4, Insightful)
"Just recently?" That's been a standard example in introductory statistics classes for many decades.
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However, very recently the BBC and the like have been publishing these sorts of things for the general audience, with clever visualsiations. It's often hard to grasp how exactly a 1% false positive rate can completely undo the benefits of a 1% false negative rate.
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"Just recently?" That's been a standard example in introductory statistics classes for many decades.
I think the he meant in geologic time.
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There's no such thing as a 'bad test' that has a high rate of accuracy, there are only people who are using the test wrong.
With 86% accuracy, you can't rely on this test... But if it comes up positive, then you know you had better check them with a better, more expensive, less fallible test.
If this test were cheap enough to use it on every patient that came in for anything, it would be a -huge- boon to society. If it cost 10x what a checkup costs, it'd be utterly useless.
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In my example, in the population 99.9% of the people don't have the disease. In those that tested positive, 90% still don't have the disease. That's with a 99% accurate test.
It's very difficult to effectively use a test that has an error rate of on the order of 17%. Or to be more accurate: A false negative rate of about 17%, and a false positive rate of "less than 83""....
But yes, you're right. It only becomes bad when people use the test wrong.
The research I don't remember the reference to however showed t
Socialism (Score:1)
Yeah, right! (Score:2)
Very poor reporting (Score:3, Insightful)
Very poor reporting here, and not juts from slashdot alone this time.
Two of the links talk about research done in the UK researchers, the third link about that it is done in Israel. One article mentions 62 volunteers, another 94. While it seems they are talking about the same research project - none is referring to the other though.
And of course that 83% number. That means 17% false negatives for cancer patients? How is the false positive rate then for non-patients? In other words: how useful is this test in real life? If healthy people still get a say 70% positive rate it's quite useless I'd say.
Interesting and all that a breath analyses could indicate the presence of cancer but the articles as linked do not make me believe it really exists in a working sense or that it is actually useful at this time. The articles linked at least are too light on detail, and even state facts differently. Unless there are two research groups working on the same thing together (one in UK, the other in Israel), but then why don't the articles refer to this fact?
Give credit where credit is due (Score:1)
All three articles credit Israeli researchers for having made the discovery. The only relationship this story has with the UK is that the first link happens to be a UK newspaper.
Less than 83%? (Score:3, Insightful)
Hooray, they are only 17% likely to get a false negative on a sick person, and something less than 83% (82%? 50%?) likely to get a false positive on someone healthy.
Combining that with the statistical problem of detecting a rare disease, that's not really useful as the number of true positives vanishes against that of false positives. (Even assuming their results aren't down to a correlation like smoking.)
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Insurance (Score:1)
A breathalyzer for Cancer? Seems misguided (Score:2)
Don't you think Cancer sufferers have enough to deal with that they don't need to be stopped at random while driving their cars and subjected to additional tests? They must be allowed to continue to drive or how will they get to their chemotherapy appointments? Is there any evidence that Cancer patients are the cause of accidents? I'm not sure I like this. :-)
this is just a easy way for you to have your healt (Score:2)
this is just a easy way for you to have your health care taken away from you also your job as well as your employer does not want to have to cover the costs of cancer. We need a health plan that blocks that crap be for we start useing stuff like this.
False Positive Example (Score:2)
Suppose 1 out of 10,000 people in the USA have HIV. Suppose an HIV test has a 99.9% chance of detecting HIV in infected people, and a 99.9% chance of testing negative in people without HIV.
Then, suppose we test 10,000 people.
Among the infected, we will get an average of .999 people who test positive. Among the non-infected, we will get .001 * 9999 = 9.99 people who test positive.
Thus, among people who tested positive, only .999/9.99 = about 10% will actually be infected.
CORRECTION (Score:2)
That would actually be .999/(.999 + 9.99) = 9%.
This test already existed (Score:1, Redundant)
There is an easier way to detect lung cancer via sniffing someone's breath. Ask them how long and how much they smoke, sniff their breath. Cigarette breath? Cancer!
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Early detection helps? How so? (Score:2)
If everyone who had cancer detected early NEVER DIED, this might make some sort of sense. Since they WILL DIE, we have to change the way to tell if we've helped from "Didn't die" to "Didn't die in the next X years." Of course early detection helps THAT situation.
Let's take the case of someone getting cancer at age 50 and dying of it at age 65. Without detection, they'd wouldn't know til near the end, sa
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Just a statistical game.
83%.. (Score:2)