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Biotech Science

Ancestry Surprises From New Genetics Analysis Method 223

An anonymous reader commends a recently published study involving a new way to analyze genetic variation in human populations (full article published in PLOS Genetics): "[S]cientists from Ireland, the UK and the US analysed 2,540 genetic markers in the DNA of almost 1,000 people from around the world whose genetic material had been collected by the Human Genome Diversity Project. The results include a number of surprises... the Yakut people of northern Siberia were found to have received a significant genetic contribution from the population of the Orkney Islands, which lie off the coast of Scotland... there must have been a period of gene flow from northern Europe to east Asia. The study also shed light on the peopling of the Americas, as the results suggest that the native populations of north and south America have different origins."
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Ancestry Surprises From New Genetics Analysis Method

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  • by Anonymous Coward on Wednesday May 28, 2008 @01:10AM (#23566953)
    A lot of people didn't want to give up on the idea that the arctic bridge was the only way people got to the Americas, when it made much more sense that some people could've traveled the ocean to settle here.
    • Re: (Score:2, Funny)

      by Anonymous Coward
      Mormons have been saying this for nearly 200 years. No, they don't claim that they're the only people that arrived there, only a portion.
    • Polynesians (Score:5, Interesting)

      by Bananatree3 ( 872975 ) on Wednesday May 28, 2008 @01:25AM (#23567041)
      If people reached Easter Island [google.com], which is almost off the coast of South America, what would have stopped Polynesian explorers from traveling all the way to Chile? It seems statistically low that explorers would have been able to hit a tiny island off the coast of S.A. and not have at least had one or two exploratory parties hit the coast.

      This isn't to say Polynesians were the first to South America, as Easter Island was populated around 2000 years ago while S.A. was populated many thousands of more years before that. However, it seems likely that there might have been genetic mixing between Polynesians and South American coastal tribes.

      • Re:Polynesians (Score:5, Informative)

        by hengist ( 71116 ) on Wednesday May 28, 2008 @02:20AM (#23567305)
        > If people reached Easter Island, which is almost off the coast of South America, what would have stopped Polynesian explorers from
        > traveling all the way to Chile?

        As I understand it, current thinking is that polynesians did make it to South America, which is where they got gourds and sweet potatoes from. Then, they turned around and followed the prevailing winds home.

        Thor Heyerdahl thought that polynesians came from South America and followed the prevailing winds in migrating west. But, genetic evidence proves that they come from Taiwain. The current theory is that they explored into the wind because it gave them a free trip home if they didn't find anything.

      • Re:Polynesians (Score:5, Interesting)

        by DerangedAlchemist ( 995856 ) on Wednesday May 28, 2008 @02:59AM (#23567457)
        Recently, ancient chicken DNA from South America was found to be most closely related to Polynesian chickens. I believe it was specifically chickens from Tonga, which is close to Easter Island. Previously, there was some dispute because carbon dating of the oldest chicken skeletons suggested they were a couple of hundred years older than the Spanish had arrived.
        So it probably did occur something like you suggest, even if the human populations were wiped out by local tribes and show no genetic mixing.
        • by maglor_83 ( 856254 ) on Wednesday May 28, 2008 @03:22AM (#23567557)

          carbon dating of the oldest chicken skeletons suggested they were a couple of hundred years older than the Spanish had arrived.
          You don't happen to know the results of carbon dating of the oldest chicken eggs do you? We might be able to answer the question once and for all!

        • Re: (Score:3, Funny)

          by corbettw ( 214229 )

          Recently, ancient chicken DNA from South America was found to be most closely related to Polynesian chickens.
          The two species are closely linked, yes. But you can easily tell them apart by a simple test: the Polynesian chickens have a sweet, pineapplily after taste.
      • Re: (Score:2, Informative)

        by b4upoo ( 166390 )
        Considering the remarkable ability of Chinese vessels in the era before Christ we may have Chinese settlers in early South America. Japanese vessels are another distinct possibility.
        If we go back about 14,000 years and get any good information on which of the Asian nations allowed females on board ships we might get a better clue as to early colonization. Or it just might be that only males made it to the Americas in the early days and that they bred with wha
        • silly (Score:3, Insightful)

          by nguy ( 1207026 )
          Considering the remarkable ability of Chinese vessels in the era before Christ we may have Chinese settlers in early South America. Japanese vessels are another distinct possibility.

          Despite extensive Chinese record keeping, there is no evidence at all that the Chinese made it to South America before the Europeans. If they had made it, they would have encountered a populated continent with many different cultures already, quite able to defend themselves against a few Chinese ships. If it hadn't been for s
          • Re:silly (Score:4, Interesting)

            by cheesybagel ( 670288 ) on Wednesday May 28, 2008 @08:31AM (#23569111)
            You are forgetting gunpowder guns, steel armor, and horses. Those improved the chances significantly. The fact that at least in Central America the natives were a bunch of bickering and warring tribes helped as well. Try reading about how Cortes invaded Tenochtitlan. If I was getting my place raided and my people enslaved to provide for live sacrifices, I would have joined the Spanish too. Besides, they may have got smallpox, but we got gonorrhea.
            • Re:silly (Score:4, Informative)

              by DerangedAlchemist ( 995856 ) on Wednesday May 28, 2008 @10:17AM (#23570209)
              Disease made all the difference. Europeans had gunpowder, gun, steel armor and horses over the Africans too, but Africa had it's own terrible diseases. The dominant population in Africa is still black. It's estimated that 80-95% of North American natives died from disease. For comparison, the black plague killed 30-50% of the population of Europe.
          • Re: (Score:3, Informative)

            by Mr. Slippery ( 47854 )

            there is no evidence at all that the Chinese made it to South America before the Europeans.

            There is some suggestive evidence [cristobalc...eibiza.com]: the Fu Sang legends [wikipedia.org], South American folktales about "people from the sea", old stone anchors found off the Pacific coast, certain artistic motifs found in both Chinese and South American art. Joseph Campbell spends a few pages on this idea in one of the essays in Flight of the Wild Gander, but I'm too lazy to dig up my copy at the moment. I don't mean to suggest that it's a well

    • Re: (Score:3, Funny)

      by elrous0 ( 869638 ) *
      They were stopped by the EVIL STATUES!
    • Re: (Score:3, Insightful)

      I love it when the books have to be redone to fit new evidence. Now I'm waiting for genetic evidence to settle the question of multiple or single origin.
    • If you read the Mormon books. (I've been seeing too many FLDS stories on the tely lately.)
  • Wow! (Score:5, Funny)

    by mrbluze ( 1034940 ) on Wednesday May 28, 2008 @01:17AM (#23566997) Journal

    there must have been a period of gene flow from northern Europe to east Asia.
    That was one helluva Khyber toss!
  • by steelfood ( 895457 ) on Wednesday May 28, 2008 @01:17AM (#23566999)
    Well, there's anthropological evidence that there were several migrations from Asia to the Americas, namely, two island-hopping sea routes and one over the land bridge in the north. This just sort of confirms this idea.
    • Re: (Score:3, Funny)

      I knew my boss had something to do with cannibals.
  • by Frekko ( 749706 ) on Wednesday May 28, 2008 @01:25AM (#23567039)
    This story sparked my interest so I searched for a while on the internet to find some maps of what the world looked like back in the ages and where evidence of people has been found linked with DNA evidence of how people actually have moved.
    I sadly came up with nothing... anyone who knows where to find anything like this?
    • by ya really ( 1257084 ) on Wednesday May 28, 2008 @01:58AM (#23567195)
      Probably one of the best sources I can think of off the top of my head is the book, Guns Germs and Steel. The book gives a great in depth look at the origins of man, and the crops/domesticated animals we eat as well as lots of maps showing movements through the ages. It's a pretty long read though, but well worth it. The book also goes well into why the decendants of those from Europe and Asia control the world today and not those in Africa, North America or Oceana.
    • by ResidntGeek ( 772730 ) on Wednesday May 28, 2008 @02:11AM (#23567253) Journal
      Have you checked out Movie S1 in the current article? It's an animation of how people moved based on DNA evidence.

      Also, the world didn't look any different geologically, if that's what you mean by "what the world looked like back in the ages". The timescales of human migrations are far smaller than those of geological processes.
      • by BungaDunga ( 801391 ) on Wednesday May 28, 2008 @02:18AM (#23567291)
        Except for the Bering land bridge. That's a function of sea level, but the world did look quite a bit different. Lots more ice around, less water.
      • Re: (Score:2, Interesting)

        by ombwiri ( 1203136 )
        While continents would have been pretty much in the same positions as they are now there would have been massive differences in the actual landscape. Just going from memory at around 12000BCE you had the Bering Strait land bridge, large parts of (what is now) the North Sea and English Channel were plains like hunting grounds for nomadic societies and western Sweden/southern Norway was much more a land of lakes, inlets and islands due to a higher than present sea level.
    • Re: (Score:2, Informative)

      by Rashdot ( 845549 )
    • The world looked the same as it does now, minus the air and water pollution, etc. Continental drift is less than a mile in 10,000 years, and the ice caps have been fairly stable during that time as well.
  • by CptNerd ( 455084 ) <adiseker@lexonia.net> on Wednesday May 28, 2008 @01:26AM (#23567045) Homepage
    There's not as much area when you move further north, so it's not surprising that the peoples up there would interact more. There's probably been some interaction with the Ainu people of Japan, too, due to many Caucasoid traits they have. The one thing about Homo Sapiens is, we tend to move around a lot.
  • by whoever57 ( 658626 ) on Wednesday May 28, 2008 @01:49AM (#23567155) Journal
    From the summary:

    In their proposed scenario, the population which first colonised North East Asia also crossed the Bering Strait and eventually made it to South America. This population was subsequently replaced by a population more closely related to modern East Asians. These people also successfully crossed the Bering Strait and contributed to the ancestry of the native North Americans.
    So what does this mean for Native Americans? They were aggressive immigrants who displaced the original population?
    • by Moraelin ( 679338 ) on Wednesday May 28, 2008 @02:37AM (#23567373) Journal
      Well, primitive tribes _were_ extremely aggressive, and did fight all the time.

      On the other hand "contributed to the ancestry of the native North Americans" implies interbreeding, rather than genocide. I.e., they fucked their way across two continents.

      It's not exactly surprising, though. A staple of tribal warfare, and it even lasted well into Iron Age in Greece for example, was raiding for another tribe's women, not just their food.

      Life expectancy for women was rather disproportionately lower than for men in primitive societieties, and for men it wasn't as high as to reach andropause first. So eventually a lot of still able men were left with the prospect of either finding another woman somehow, or playing with Miss Rosy Palm for the next 5 to 10 years. Meanwhile the next tribe had plenty of women. Are you thinking what I'm thinking, Pinky?

      Of course then the next tribe had an acute shortage of women, so the cycle of violence continued.

      So I'm saying that interbreeding would have been inevitable. When the newly arrived East Asians won a raid, they got some women from the previous populations, when they lost one, the opposite would happen.
      • Re: (Score:2, Funny)

        by Anonymous Coward
        uh oh. I hear the chinese are in need of some 100 million women
        • Mods, this isn't funny, and could end up being a determining factor in global geopolitics for the foreseeable future. What happens to all those lonely men who can't get women for themselves? Why, they join the Army of course. And what do you do with an army? Why, go get yourself some women of course.
      • Well, primitive tribes _were_ extremely aggressive, and did fight all the time.
        <sarcasm>Oh bullshit. We all know the "primitive man" was a Noble Savage that lived in peace and harmony will other Native Peoples and Nature, you white oppressor!</sarcasm>
    • by mrbooze ( 49713 )
      This was true of most of Africa as well. Africa used to have a much more diverse tribal population, but most of them were over time replaced by a few more aggressive groups, long before the white people arrived and began dabbling in free labor sources.
    • by kripkenstein ( 913150 ) on Wednesday May 28, 2008 @04:06AM (#23567735) Homepage

      So what does this mean for Native Americans? They were aggressive immigrants who displaced the original population?
      Essentially all human populations are/were aggressive invaders at some point. See Jared Diamond's writings, for example, about how the Bantu came to occupy most of Africa, how the Han Chinese did the same for China, etc., etc.

      We see things as they are right now, and just presume that the clock was frozen before the last few centuries. So, we see black people in Africa and Chinese people in China and assume they were always there. They weren't, they displaced someone to get there. It's just been forgotten.

      Not that this makes any of it 'right' or 'justified', nor does it make it 'wrong' or 'unjustified'. These are the facts. Make of them what you will.
    • Re: (Score:3, Interesting)

      by will_die ( 586523 )
      So what does this mean for Native Americans? They were aggressive immigrants who displaced the original population?
      Yep and that is not a surprise. If you read the oral histories of the various current North American Tribes they tell of thier ancesors replacing the people who lived there before.
      Many times it was done in war but you also have things like tribes forming together to form a new distinct group, or outsiders coming in and over time they replace the people formerly there and the old group melti
  • by Jane Q. Public ( 1010737 ) on Wednesday May 28, 2008 @02:20AM (#23567303)
    Extensive studies of mitochondrial DNA have pretty much confirmed migrations from east Asia to northwest America, then down south. There were, of course, more than one wave of such migrations. I doubt very much that the natives of north and south america "have different origins", because that would contradict well-established evidence that this is not so. However, they could certainly have a different mix of dna mutations showing various mixes from different areas.
    • by aibob ( 1035288 ) on Wednesday May 28, 2008 @02:34AM (#23567367)
      Remember that there is a difference between using mitochondrial DNA (the studies you cited) and autosomal DNA (this study). With mitochondrial DNA, the only information that you get is along the maternal line, so you're missing a lot of the data. Looking back 20 generations, for example, you're only looking at one ancestor out of about a million. It would be possible for two groups to come over but only one be reflected in the maternal line.
      • Mitocodrial DNA is very effective at tracking migration patterns of populations. Even if the Y-side or autosomal data shows some mixing in of other genes, that still negates the possibility of "different origins".
    • by CAIMLAS ( 41445 )
      The thing that gets me is that there's usually a lot of emphasis on "China" when in reality, there were likely just as many, if not more, migrations to the Americas from the area which is now (and was then) India. India was a nation long before China was even populated.
  • by syousef ( 465911 ) on Wednesday May 28, 2008 @03:00AM (#23567461) Journal
    Yakut people of northern Siberia were found to have received a significant genetic contribution from the population of the Orkney Islands, which lie off the coast of Scotland.

    My wife's pregnant with her first. We had a girl's name picked but were having hell trying to find a boy's name. She was having trouble so we had another ultrasound. We now KNOW it's a boy. I think this story has settled it. I'll be naming my first born Vladamir McHaggis. Being beaten up will build the boy's character.
  • by G3ckoG33k ( 647276 ) on Wednesday May 28, 2008 @03:02AM (#23567471)
    The articles "mtDNA Variation of Aboriginal Siberians Reveals Distinct Genetic Affinities with Native Americans" and "Mitochondrial DNA Variation in the Aboriginal Populations of the Altai-Baikal Region Implications for the Genetic History of North Asia and America" from 2004 indicate that ALL native Americans have a single origin. I guess the controversy of single or dual origins lives on and if I understood it correctly the field is still open for reinterpretations.
    • by FurtiveGlancer ( 1274746 ) <AdHocTechGuy@@@aol...com> on Wednesday May 28, 2008 @06:56AM (#23568453) Journal
      If it's science, it should ALWAYS be open for reinterpretation as more data is collected and as analysis techniques improve or are replaced with better procedures.

      IMHO, an open mind should be, well, open.
      • If it's science, it should ALWAYS be open for reinterpretation as more data is collected and as analysis techniques improve or are replaced with better procedures.

        Unless you're a proponent of anthropogenic climate change. In that case it's ALL settled science and there is a grand consensus with nothing left to discover or analyze.

        (that was sarcasm btw)

        No science is ever settled. Even models like newtonian physics, which still 'works' for most calculations we need, get superceded by newer models (i.e. rela
        • Actually, I've observed that many (including not a few scientists) defending evolutionary theory tend to be more dogmatic and less open to discussion than the ACC crowd. Not that the ACC or other environmental activists are shrinking violets.

          In math and physics, no matter how good it looks or works or fits with experimental data, a model is a representation, not exactly the real thing. As discovered when Newtownian physics were determined to be a special case of relativity where v << c. Models ex
          • There's an enormous difference between the proper skeptical view required for good science and the "This is too complicated for me to personally understand so it must be wrong, let's go shopping!" attitude displayed by the global warming denier and anti-evolution crowds.
            • Most Anthropomorphic Climate Change (ACC) deniers I've heard don't argue the observations of average temperature increases, but argue the root causes and/or significance of these observations. They also argue the projections offered by ACC promoters as scientifically unsound or overly dire (read: hand picked data).

              The "anti-evolution" crowd is very diverse and hard to characterize. I'm part of the "anti-evolution as unassailable fact" crowd. For some, like myself, we simply prefer to allow the theory

          • by kevin42 ( 161303 )
            I think you are confusing a theory and a hypothesis (or a hypothetical theory). A theory isn't really proven by experiments, but a hypothesis is. A theory changes as evidence changes.
      • IMHO, an open mind should be, well, open.

        That's right... just not so open that your brain falls out. Hence why I happily close my mind to, for example, the ramblings of ID proponents.
        • You might want to look around at your feet for something gray and roughly hemispherical. ;-)

          If you don't listen to others, despite their differing views, you'll never know if they have (or have stumbled) upon a substantive and salient point that deserves your attention. If you don't respect the "opposition" enough to listen, why should they respect you enough to listen to you? People are, in my experience, much more likely to listen to you if you are attentive, respectful and not dismissive while arguing

          • People are, in my experience, much more likely to listen to you if you are attentive, respectful and not dismissive while arguing your point of view.

            You're convolving an open mind (one willing to accept new ideas and facts) with a civil one. My mind is not open to Intelligent Design because it's a dressed up version of creationism, and as such has no explanatory or predictive power and is not a valid scientific theory. Will I be respectful in a debate with someone on the topic? Certainly. But I will hap
  • Nations of Europe (Score:3, Interesting)

    by eggspurt ( 845109 ) on Wednesday May 28, 2008 @08:16AM (#23568963)
    The movies they attach are not very good.

    I have some Python source code for doing similar things with the case of European nations on http://www.stat.columbia.edu/~cook/movabletype/archives/2007/06/animated_mds_co.html [columbia.edu] (there is an animated GIF there).

    A bit more discussion about my methodology is at http://www.stat.columbia.edu/~cook/movabletype/archives/2007/06/nations_of_euro.html [columbia.edu]

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