John "Jack" R. Horner is the Curator of Paleontology at the Museum of the Rockies, adjunct curator at the National Museum of Natural History, and one of the most famous paleontologists in the world. Known in the scientific community for his research on dinosaur growth and whether or not some species lived in social groups, he is most famous for his work on Jurassic Park and being the inspiration for the character of Alan Grant. Horner caused quite a stir with the publication of his book, How to Build a Dinosaur: Extinction Doesn't Have to Be Forever, in which he proposes creating a "chickensaurus" by genetically "nudging" the DNA of a chicken. Jack has agreed to step away from the genetics lab and put down the bones in order to answer your questions. As usual, you're invited to ask as many questions as you'd like, but please divide them, one question per post.
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giminy writes "Clay Shirky has a thought-provoking piece on depression in the hacker community. While hackers tend to be great at internet collaboration on software projects, we often fall short when it comes to helping each other with personal problems. The evidence is only anecdotal, but there seems to be a higher than average incidence of mental health issues among hackers and internet freedom fighters. It would be great to see this addressed by our community through some outreach and awareness programs."
sciencehabit writes "In a new study, researchers find that a single number that describes the complexity of feather patterns on bird chests, a parameter called the fractal dimension, is linked to whether a bird has a strong immune system or is malnourished. When scientists restricted the food of red-legged partridges, the patterns on their chests had a lower fractal dimension than those sported by their well-fed colleagues. The food-restricted birds, on average, weighed 13% less than their well-fed colleagues and had weaker immune systems, which makes fractal dimension an easily recognizable sign of a potential mate's health and vitality, the researchers contend."
skade88 writes "NPR is reporting on a study in which the author claims to have found the formula to predict the average life span of members of a species. It does not apply to specific individuals of that species, only to the average life span of members of the species as a whole. From the article: 'It's hard to believe that creatures as different as jellyfish and cheetahs, daisies and bats, are governed by the same mathematical logic, but size seems to predict lifespan. The formula seems to be nature's way to preserve larger creatures who need time to grow and prosper, and it not only operates in all living things, but even in the cells of living things. It tells animals for example, that there's a universal limit to life, that though they come in different sizes, they have roughly a billion and a half heart beats; elephant hearts beat slowly, hummingbird hearts beat fast, but when your count is up, you are over.'"
MatthewVD writes "Infrared cameras on satellites and night vision goggles could soon use lasers to cool their components. According to the study published in Nature, researchers in Singapore were able to cool the semiconductor cadmium sulfide from 62 degrees fahrenheit to -9 degrees by focusing a green laser on it and making it fluoresce and lose energy as light. Since they require neither gas nor moving parts, they can be more compact, free from vibration and not prone to mechanical failure."
Zothecula writes "NASA and the Canadian Space Agency (CSA) have begun practicing satellite refueling in space on a test bed outside the International Space Station (ISS). In a series of tests that started on January 14 and are scheduled to continue until the 25th, the two space agencies are using the Robotic Refueling Module (RRM) and Canada's Special Purpose Dexterous Manipulator, or Dextre, robot to carry out simulated refueling operations. The purpose of these tests is to develop refueling methods aimed at extending the life of satellites and reducing the amount of space debris orbiting the Earth."
angry tapir writes "An international team of astronomers has used the CSIRO-run Australia Telescope Compact Array to measure the cooling of the universe since the Big Bang. According to the CSIRO, it is the most accurate reading yet of how hot the universe used to be. When the universe was half its current age its temperature was -267.92 degrees Celsius (5.08 Kelvin), the team found, which is warmer than today's universe (-270.27 degrees Celsius)."
sciencehabit writes "Male scientists — especially at the upper echelons of the profession — are far more likely than women to commit misconduct. That's the bottom line of a new analysis by three microbiologists of wrongdoing in the life sciences in the United States. Ferric Fang of the University of Washington, Seattle; Joan Bennett of Rutgers University; and Arturo Casadevall of Albert Einstein College of Medicine combed through misconduct reports on 228 people released by the U.S. Office of Research Integrity (ORI) over the last 19 years. They then compared the gender balance — or imbalance, in this case — against the mix of male and female senior scientists and trainees to gauge whether misconduct was more prevalent among men. A remarkable 88% of faculty members who committed misconduct were men, or 63 out of 72 individuals. The number of women in that group was one-third of what one would expect based on female representation in the life sciences."
SternisheFan sends news of researchers who encoded an MP3, a PDF, a JPG, and a TXT file into DNA, along with another file that explains the encoding. The researchers estimate the storage density of this technique at 2.2 petabytes per gram (abstract). "We knew we needed to make a code using only short strings of DNA, and to do it in such a way that creating a run of the same letter would be impossible. So we figured, let's break up the code into lots of overlapping fragments going in both directions, with indexing information showing where each fragment belongs in the overall code, and make a coding scheme that doesn't allow repeats. That way, you would have to have the same error on four different fragments for it to fail – and that would be very rare," said one of the study's authors. "We've created a code that's error tolerant using a molecular form we know will last in the right conditions for 10 000 years, or possibly longer," said another.
astroengine writes "Scientists have long puzzled over why the surface of the sun is cooler than its corona, the outer hazy atmosphere visible during a solar eclipse. Now, thanks to a five-minute observation by a small, but very high-resolution ultraviolet telescope, they have some answers. Hi-C, which was launched aboard a suborbital rocket to study the sun without interference from Earth's atmosphere, revealed interwoven magnetic fields braided like hair. When the braids relaxed, they released energy, heating the corona (abstract). 'I had no idea we would see structures like that in the corona. Seeing these braids was very new to me,' astrophysicist Jonathan Cirtain with NASA's Marshall Space Flight Center in Huntsville, Ala., told Discovery News."
Jeremiah Cornelius writes "Researchers with the European Food Safety Authority discovered variants of the Cauliflower mosaic virus 35S in the most widely harvested varieties of genetically-modified crops, including Monsanto's RoundupReady Soy and Maze. According to the researchers, Podevin and du Jardin, the particular 'Gene VI' is responsible for a number of possible consequences that could affect human health, including inhibition of RNA silencing and production of proteins with known toxicity. The EFSA is endorsing 'retrospective risk assessment' of CaMV promoter and its Gene VI sequences — in an attempt to give it a clean bill of health. It is unknown if the presence of the hidden viral genes were the result of laboratory contamination or a possible recombinant product of the resultant organism. There are serious implications for the production of GMO for foodstuffs, given either possibility."
coondoggie writes "A new company intends by 2015 to send a fleet of tiny satellites to mine passing asteroids for high-value metals. Deep Space Industries Inc.'s asteroid mining proposal begins in 2015, when the company plans to send out a squadron of 55lb cubesats, called Fireflies, that will explore near-Earth space for two to six months looking for target asteroids. The company's CEO said, 'Using resources harvested in space is the only way to afford permanent space development. More than 900 new asteroids that pass near Earth are discovered every year. They can be like the Iron Range of Minnesota was for the Detroit car industry last century — a key resource located near where it was needed. In this case, metals and fuel from asteroids can expand the in-space industries of this century. That is our strategy.'"
MTorrice writes "About 320,000 soldiers returning from the wars in Afghanistan and Iraq have struggled with neurological problems associated with traumatic brain injury, according to the Rand Corporation. Some veterans experience symptoms, such as memory loss and anxiety, without noticeable physical signs of brain injury. Now researchers report a possible chemical signature: Levels of a certain lipid spike in the brains of mice exposed to mild explosions (abstract; full article paywalled). This lipid could serve as a way to diagnose people who are at risk of developing neurological disorders after a blast, the scientists say."
An anonymous reader writes "Radical Islamist hackers have been harassing Egyptologist Kate Phizackerley's online journal Egyptological and her blog KV64. Phizackerley and her team finally got tired of it and shut their online work down. As blogger Roger Pearse says, 'A bunch of violent scumbags... who never have contributed in any way to the web, have successfully interfered with the scientific effort of the entire human race... Next year there will be more.' How do we route around damage like this?"
carmendrahl writes "A science historian has collaborated with a publisher to digitize a one-of-a kind collection of chemists' signatures. In the shadow of World War II, a Japanese chemist named Tetsuo Nozoe traveled outside his land for the first time, and collected autographs from the people he met on the way. This turned into a forty year hobby, and a 1200-page collection. The digital collection sucks chemists in for hours — it's full of cartoons, jokes, haikus, and scribbles the signers admit to having scrawled 'in a drunken state.' Nobel Prizewinners and ordinary chemists signed side-by-side. The Nozoe notebook collection will be open access for at least three years, with a big goal being to identify all the 'mystery' signatures in the collection with help from readers."
ananyo writes "Scrounging chemicals and equipment in their spare time, a team of chemistry bloggers is trying to replicate published protocols for making molecules. The researchers want to check how easy it is to repeat the recipes that scientists report in papers — and are inviting fellow chemists to join them. Blogger See Arr Oh, chemistry graduate student Matt Katcher from Princeton, New Jersey, and two bloggers called Organometallica and BRSM, have together launched Blog Syn, in which they report their progress online. Among the frustrations that led the team to set up Blog Syn are claims that reactions yield products in greater amounts than seems reasonable, and scanty detail about specific conditions in which to run reactions. In some cases, reactions are reported which seem too good to be true — such as a 2009 paper which was corrected within 24 hours by web-savvy chemists live-blogging the experiment; an episode which partially inspired Blog Syn. According to chemist Peter Scott of the University of Warwick in Coventry, UK, synthetic chemists spend most of their time getting published reactions to work. 'That is the elephant in the room of synthetic chemistry.'"
lukej writes "Over eleven years ago, the possibility of using the retired Homestake Mine as an underground science laboratory was first proposed. Today the local newspaper gives a science-filled tour of that facility, along with a short photo tour, and decent descriptions of some of the experiments it hosts (Majorana, LUX, Long Baseline Neutrino Experiment). Some fairly interesting deep, dirty, and real physical science!"
The Bad Astronomer writes "Studies of carbon-14 in Japanese trees and beryllium-10 in Antarctic ice indicate the Earth was hit by a big radiation blast in 775 AD. Although very rare, occurring only once every million years or so, the most likely culprit is a gamma-ray burst, a cosmic explosion accompanying the birth of a black hole. While a big solar flare is still in the running, a GRB from merging neutron stars produces the ratio of carbon and beryllium observed, and also can explain why no bright explosion was seen at the time, and no supernova remnant is seen now."
Zothecula writes "Scientists based at Empa, the Swiss Federal Laboratories for Materials Science and Technology, have set a new efficiency record for thin-film copper indium gallium (di)selenid (or CIGS) based solar cells on flexible polymer foils, reaching an efficiency of 20.4 percent. This is an increase from a previous record of 18.7 percent set by the team back in 2011."
SternisheFan notes that scientists at Cambridge University have found four-stranded DNA in human cells for the first time. "If you've ever studied genetics in school or college, you'll know that the structure of DNA is a double helix. You likely know that DNA carries all of our genetic code. While traditionally we think of only double helix DNA, scientists from Cambridge University in England have made an interesting discovery. According to the researchers, a quadruple helix is also present in some cells and is believed to relate to cancer in some ways. According to the researchers, controlling these quadruple helix structures could provide new ways to fight cancer. The scientists believe the quadruple helix may form when the cell has a certain genotype or operates in a certain dysfunctional state. Scientists have been able to produce quadruple helix material in test tubes for years. The material produced is called the G-quadruplex. The G refers to guanine, which is one of the base pairs that hold DNA together. The new research performed at the University is believed to be the first to firmly pinpoint quadruple helix in human cells."